Discussion:
[Refdb-devel] RPM for refdb 0.9.7 on Mandriva !
Stéphane Téletchéa
2006-06-29 09:59:14 UTC
Permalink
I'm on the verge of releasing the rpm ;-)

This mail is for information and some rfc.

The rpm i have created produces two rpms:
refdb : the server
refdb-clients : refdbc, refdba, refbib

According to Mandriva's policy (and following FHS + LSB), see below the
list of files (it is long but please have a look at them to check if i
have not missed one).

The server is packaged as :
/etc/refdb/ default configuration files
/usr/bin/ binaries
/usr/share/man man pages
/usr/share/refdb data for refdb
/usr/share/doc/refdb-0.9.7/ documentation
/var/lib/refdb/db db directory for embedded database engine
/var/www/refdb/ web interface (admin + client)

/etc/httpd/conf/webapps.d/refdb.conf
/etc/php.d/A53_refdb.ini those two are for the phpweb interface


What is on my todo list ?

1 - checking everything works (already done for the server and basic
configuration files)
2 - provide an initscript FHS compliant (the configuration is different
on BSD/debian and Mandriva/RH/Suse)
3 - be able to use correctly the web interface (actually i can use it
but my attemps to insert a reference failed)
4 - patch the marc2ris.pl since a new release is done (or you'll do a
0.9.7.1 ?)
5 - try various database engine (so far, postgresql and mysql).
6 - take comments and incorporate them (if any)

If anyone is willing to test the rpm, let me know, i think i'll go
through these steps and release the rpm file into Mandriva's mirror
(thus, it'll become an official package of the distribution, available
for all).

I'm open to suggestions, comments :-)

Stéphane

/etc/httpd/conf/webapps.d/refdb.conf
/etc/php.d/A53_refdb.ini
/etc/refdb/bib2riscgirc.example
/etc/refdb/bib2risrc.example
/etc/refdb/db2risrc.example
/etc/refdb/marc2risrc.example
/etc/refdb/med2riscgirc.example
/etc/refdb/med2risrc.example
/etc/refdb/refdbarc.example
/etc/refdb/refdbcgirc.example
/etc/refdb/refdbcrc.example
/etc/refdb/refdbdrc.mysql.example
/etc/refdb/refdbdrc.pgsql.example
/etc/refdb/refdbdrc.sqlite.example
/etc/refdb/refdbdrc.sqlite3.example
/etc/refdb/refdbibrc.example
/etc/refdb/refdbxmlrc.example
/usr/bin/bib2ris
/usr/bin/db2ris
/usr/bin/eenc
/usr/bin/en2ris
/usr/bin/marc2ris
/usr/bin/med2ris
/usr/bin/refdb-backup
/usr/bin/refdb-bug
/usr/bin/refdb-init-pgsql.sh
/usr/bin/refdb-init.sh
/usr/bin/refdb-ms
/usr/bin/refdb-restore
/usr/bin/refdb_dos2unix
/usr/bin/refdb_tex2mail
/usr/bin/refdbctl
/usr/bin/refdbd
/usr/bin/refdbjade
/usr/bin/refdbnd
/usr/bin/refdbxml
/usr/bin/refdbxp
/usr/bin/runbib
/usr/lib/debug
/usr/lib/debug/usr
/usr/lib/debug/usr/bin
/usr/lib/debug/usr/bin/bib2ris.debug
/usr/lib/debug/usr/bin/eenc.debug
/usr/lib/debug/usr/bin/refdba.debug
/usr/lib/debug/usr/bin/refdbc.debug
/usr/lib/debug/usr/bin/refdbd.debug
/usr/lib/debug/usr/bin/refdbib.debug
/usr/lib/debug/usr/bin/refdbxp.debug
/usr/share/doc/refdb-0.9.7
/usr/share/doc/refdb-0.9.7/AUTHORS
/usr/share/doc/refdb-0.9.7/COPYING
/usr/share/doc/refdb-0.9.7/ChangeLog
/usr/share/doc/refdb-0.9.7/INSTALL
/usr/share/doc/refdb-0.9.7/NEWS
/usr/share/doc/refdb-0.9.7/README
/usr/share/doc/refdb-0.9.7/README.urpmi
/usr/share/doc/refdb-0.9.7/UPGRADING
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/usr/share/man/man1/refdb-backup.1.bz2
/usr/share/man/man1/refdb-init.sh.1.bz2
/usr/share/man/man1/refdb-ms.1.bz2
/usr/share/man/man1/refdb-restore.1.bz2
/usr/share/man/man1/refdb.sh.1.bz2
/usr/share/man/man1/refdba.1.bz2
/usr/share/man/man1/refdbc.1.bz2
/usr/share/man/man1/refdbctl.1.bz2
/usr/share/man/man1/refdbd.1.bz2
/usr/share/man/man1/refdbib.1.bz2
/usr/share/man/man1/refdbjade.1.bz2
/usr/share/man/man1/refdbnd.1.bz2
/usr/share/man/man1/refdbxml.1.bz2
/usr/share/man/man1/refdbxp.1.bz2
/usr/share/man/man1/runbib.1.bz2
/usr/share/man/man7/RefDB.7.bz2
/usr/share/man/man8/refdb.8.bz2
/usr/share/refdb
/usr/share/refdb/css
/usr/share/refdb/css/refdb.css
/usr/share/refdb/db
/usr/share/refdb/declarations
/usr/share/refdb/declarations/docbook.dcl
/usr/share/refdb/declarations/xml.dcl
/usr/share/refdb/dsssl
/usr/share/refdb/dsssl/bibdb2tei.dsl
/usr/share/refdb/dsssl/catalog
/usr/share/refdb/dsssl/citations.dsl
/usr/share/refdb/dsssl/db2ris.dsl
/usr/share/refdb/dsssl/html
/usr/share/refdb/dsssl/html/docbook-refdb.dsl
/usr/share/refdb/dsssl/lib
/usr/share/refdb/dsssl/lib/refdblib.dsl
/usr/share/refdb/dsssl/lib/refdbvar.dsl
/usr/share/refdb/dsssl/makecss.dsl
/usr/share/refdb/dsssl/print
/usr/share/refdb/dsssl/print/docbook-refdb.dsl
/usr/share/refdb/dtd
/usr/share/refdb/dtd/catalog
/usr/share/refdb/dtd/citationlistx.dtd
/usr/share/refdb/dtd/citationlistx.rnc
/usr/share/refdb/dtd/citationlistx.rng
/usr/share/refdb/dtd/citestylex.dtd
/usr/share/refdb/dtd/citestylex.rnc
/usr/share/refdb/dtd/citestylex.rng
/usr/share/refdb/dtd/risx.dtd
/usr/share/refdb/dtd/risx.rnc
/usr/share/refdb/dtd/risx.rng
/usr/share/refdb/dtd/xnote.dtd
/usr/share/refdb/dtd/xnote.rnc
/usr/share/refdb/dtd/xnote.rng
/usr/share/refdb/examples
/usr/share/refdb/examples/Makefile.template
/usr/share/refdb/examples/dbtest.sgml
/usr/share/refdb/examples/dbtest.short.sgml
/usr/share/refdb/examples/dbxtest.short.xml
/usr/share/refdb/examples/dbxtest.xml
/usr/share/refdb/examples/readme.examples
/usr/share/refdb/examples/serif.bib
/usr/share/refdb/examples/teitest.short.xml
/usr/share/refdb/examples/teitest.xml
/usr/share/refdb/examples/testrefs.ris
/usr/share/refdb/examples/testrefs.usmarc
/usr/share/refdb/examples/testrefs.xml
/usr/share/refdb/examples/xnoteset.xml
/usr/share/refdb/refdb.cat
/usr/share/refdb/sql
/usr/share/refdb/sql/empty.mysql.dump
/usr/share/refdb/sql/empty.pgsql.dump.in
/usr/share/refdb/sql/refdb-upgrade.sql
/usr/share/refdb/sql/refdb.dump.mysql
/usr/share/refdb/sql/refdb.dump.mysql41
/usr/share/refdb/sql/refdb.dump.pgsql
/usr/share/refdb/sql/refdb.dump.sqlite
/usr/share/refdb/styles
/usr/share/refdb/styles/Eur.J.Pharmacol.xml
/usr/share/refdb/styles/J.Biol.Chem.xml
/usr/share/refdb/styles/bibtex-abbrev.xml
/usr/share/refdb/styles/bibtex-full.xml
/usr/share/refdb/styles/schemas.xml
/usr/share/refdb/www
/usr/share/refdb/www/admin.php
/usr/share/refdb/www/include.php
/usr/share/refdb/www/index.html
/usr/share/refdb/www/login.php
/usr/share/refdb/www/refdb-prl-del.php
/usr/share/refdb/www/refdbadd.html
/usr/share/refdb/www/refdbadd.php
/usr/share/refdb/www/refdbadmin.php
/usr/share/refdb/www/refdbdbquery.php
/usr/share/refdb/www/refdbkajquery.html
/usr/share/refdb/www/refdbkajsearch.php
/usr/share/refdb/www/refdblogout.php
/usr/share/refdb/www/refdbq.css
/usr/share/refdb/www/refdbquery.html
/usr/share/refdb/www/refdbsearch.php
/usr/share/refdb/xsl
/usr/share/refdb/xsl/bibdb2tei.xsl
/usr/share/refdb/xsl/citations.xsl
/usr/share/refdb/xsl/common-refdb
/usr/share/refdb/xsl/common-refdb/refdbvar.xsl
/usr/share/refdb/xsl/docbk-refdb-xsl
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-fo
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-fo/docbk-refdb-fo.xsl
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-html
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-html/docbk-refdb-html.xsl
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-lib
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-lib/docbk-refdblib.xsl
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-xhtml
/usr/share/refdb/xsl/docbk-refdb-xsl/docbk-xhtml/docbk-refdb-xhtml.xsl
/usr/share/refdb/xsl/makecss.xsl
/usr/share/refdb/xsl/tei-refdb-xsl
/usr/share/refdb/xsl/tei-refdb-xsl/tei-fo
/usr/share/refdb/xsl/tei-refdb-xsl/tei-fo/tei-refdb-fo.xsl
/usr/share/refdb/xsl/tei-refdb-xsl/tei-html
/usr/share/refdb/xsl/tei-refdb-xsl/tei-html/tei-refdb-html.xsl
/usr/share/refdb/xsl/tei-refdb-xsl/tei-lib
/usr/share/refdb/xsl/tei-refdb-xsl/tei-lib/tei-refdblib.xsl
/var/lib/refdb/db
/var/www/refdb/admin.php
/var/www/refdb/include.php
/var/www/refdb/index.html
/var/www/refdb/login.php
/var/www/refdb/refdb-prl-del.php
/var/www/refdb/refdbadd.html
/var/www/refdb/refdbadd.php
/var/www/refdb/refdbadmin.php
/var/www/refdb/refdbdbquery.php
/var/www/refdb/refdbkajquery.html
/var/www/refdb/refdbkajsearch.php
/var/www/refdb/refdblogout.php
/var/www/refdb/refdbq.css
/var/www/refdb/refdbquery.html
/var/www/refdb/refdbsearch.php
--
Stéphane Téletchéa, PhD. http://www.steletch.org
Unité Mathématique Informatique et Génome http://migale.jouy.inra.fr/mig
INRA, Domaine de Vilvert Tél : (33) 134 652 891
78352 Jouy-en-Josas cedex, France Fax : (33) 134 652 901
Markus Hoenicka
2006-06-29 20:37:57 UTC
Permalink
Post by Stéphane Téletchéa
According to Mandriva's policy (and following FHS + LSB), see below the
list of files (it is long but please have a look at them to check if i
have not missed one).
I couldn't see any obvious omissions from your list. I believe
everything is there.
Post by Stéphane Téletchéa
3 - be able to use correctly the web interface (actually i can use it
but my attemps to insert a reference failed)
It was just reported on this list that editing references does not
work either. I'm afraid the PHP web interface is not yet working as it
should. It is at your discretion whether you want to package a broken
interface or drop it for the time being.
Post by Stéphane Téletchéa
4 - patch the marc2ris.pl since a new release is done (or you'll do a
0.9.7.1 ?)
I'd suggest to patch it until the next release is available. I don't
want to publish another release because of a 4-line fix in one of the
scripts.
Post by Stéphane Téletchéa
If anyone is willing to test the rpm, let me know, i think i'll go
through these steps and release the rpm file into Mandriva's mirror
(thus, it'll become an official package of the distribution, available
for all).
How are the chances to turn your Mandriva RPMs into packages for the
other major RPM-based distros (Fedora, SuSE)? Is there anyone on the
list using one of these distos who could lend Stéphane a hand?

regards,
Markus
--
Markus Hoenicka
***@cats.de
(Spam-protected email: replace the quadrupeds with "mhoenicka")
http://www.mhoenicka.de
Stéphane Téletchéa
2006-06-30 10:21:36 UTC
Permalink
Post by Markus Hoenicka
Post by Stéphane Téletchéa
According to Mandriva's policy (and following FHS + LSB), see below the
list of files (it is long but please have a look at them to check if i
have not missed one).
I couldn't see any obvious omissions from your list. I believe
everything is there.
Yep, there was a duplication (www being packaged in
/usr/share/refdb-0.9.7/www and in /var/www/refdb/), and i fixed some
permissions.

BTW, i think you should not have 755 permissions for AUTHORS, ChangeLog,
COPYING, INSTALL, NEWS, READM files. They should be 644 like the file
UPGRADING for instance.
Post by Markus Hoenicka
Post by Stéphane Téletchéa
3 - be able to use correctly the web interface (actually i can use it
but my attemps to insert a reference failed)
It was just reported on this list that editing references does not
work either. I'm afraid the PHP web interface is not yet working as it
should. It is at your discretion whether you want to package a broken
interface or drop it for the time being.
Yes, this is also my conclusion, the phpweb is useless as it is. I
haven't been able to use it, even if the db was created correctly and
refdbc worked ...
Post by Markus Hoenicka
Post by Stéphane Téletchéa
4 - patch the marc2ris.pl since a new release is done (or you'll do a
0.9.7.1 ?)
I'd suggest to patch it until the next release is available. I don't
want to publish another release because of a 4-line fix in one of the
scripts.
patch done.
Post by Markus Hoenicka
Post by Stéphane Téletchéa
If anyone is willing to test the rpm, let me know, i think i'll go
through these steps and release the rpm file into Mandriva's mirror
(thus, it'll become an official package of the distribution, available
for all).
How are the chances to turn your Mandriva RPMs into packages for the
other major RPM-based distros (Fedora, SuSE)? Is there anyone on the
list using one of these distos who could lend Stéphane a hand?
I don't have such setup on my computer (or at least not yet ;-).

Things can be a little different on those systems since the dependency
tree is somewhat different and naming conventions may differ. Other than
this the rpm should be installable (i need to removed some Mandriva
specific macros in case of a general rpm).

That would require little work, but since i'm gaining experience in rpm
building, i think i'll be able to obtain it after having polished the
Mandriva rpm ;-)
Post by Markus Hoenicka
regards,
Markus
So far i've tested only refdb + pgsql and importing from examples, i'll
try to test other combinations.

Cheers,

Stéphane
--
Stéphane Téletchéa, PhD. http://www.steletch.org
Unité Mathématique Informatique et Génome http://migale.jouy.inra.fr/mig
INRA, Domaine de Vilvert Tél : (33) 134 652 891
78352 Jouy-en-Josas cedex, France Fax : (33) 134 652 901
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